Sequence Similarity Clusters for the Entities in PDB 1OMD

Entity #1 | Chains: A
ONCOMODULIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29444
95 % 2 3 24400 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 23609
70 % 2 4 18150
50 % 15 37 1121
40 % 15 37 1130
30 % 15 37 1118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.