Sequence Similarity Clusters for the Entities in PDB 1OMD

Entity #1 | Chains: A
ONCOMODULIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30091
95 % 2 3 24905 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 24074
70 % 2 4 18531
50 % 15 38 1132
40 % 15 38 1142
30 % 15 38 1124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures