Sequence Similarity Clusters for the Entities in PDB 1OM9

Entity #1 | Chains: A,B
ADP-ribosylation factor binding protein GGA1 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41627
95 % 2 2 18389
90 % 2 2 17920
70 % 3 3 12778
50 % 3 3 11416
40 % 3 3 10353
30 % 4 4 7964
Entity #2 | Chains: P,Q
15-mer peptide fragment of p56 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.