Sequence Similarity Clusters for the Entities in PDB 1OM3

Entity #1 | Chains: L,M
FAB 2G12, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 15 1013
95 % 6 15 1400 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 266 701 3
70 % 909 2287 1
50 % 1863 4633 1
40 % 1863 4633 1
30 % 2108 5461 1
Entity #2 | Chains: H,K
FAB 2G12, heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 1314
95 % 6 14 1720 Flexibility: Low
Max RMSD: 12.8, Avg RMSD: 1.8
PDBFlex
90 % 6 15 1419
70 % 901 2244 2
50 % 1864 4633 1
40 % 1864 4633 1
30 % 2109 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.