Sequence Similarity Clusters for the Entities in PDB 1OM3

Entity #1 | Chains: L,M
FAB 2G12, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 15 1003
95 % 6 15 1384 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 263 693 3
70 % 900 2264 1
50 % 1845 4587 1
40 % 1845 4587 1
30 % 2081 5392 1
Entity #2 | Chains: H,K
FAB 2G12, heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 1297
95 % 6 14 1698 Flexibility: Low
Max RMSD: 12.8, Avg RMSD: 1.7
PDBFlex
90 % 6 15 1401
70 % 892 2222 2
50 % 1846 4587 1
40 % 1846 4587 1
30 % 2082 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.