Sequence Similarity Clusters for the Entities in PDB 1OLM

Entity #1 | Chains: A,C
SEC14-LIKE PROTEIN 2 protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12922
95 % 1 3 12320 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 12136
70 % 3 5 8106
50 % 3 5 7450
40 % 3 5 6851
30 % 3 5 5999
Entity #2 | Chains: E
SEC14-LIKE PROTEIN 2 protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12922
95 % 2 3 12320 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 12136
70 % 4 5 8106
50 % 4 5 7450
40 % 4 5 6851
30 % 4 5 5999

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures