Sequence Similarity Clusters for the Entities in PDB 1OLM

Entity #1 | Chains: A,C
SEC14-LIKE PROTEIN 2 protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14981
95 % 1 3 11710 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 11555
70 % 3 5 7465
50 % 3 5 6874
40 % 3 5 6405
30 % 3 5 5731
Entity #2 | Chains: E
SEC14-LIKE PROTEIN 2 protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54223
95 % 2 3 11710 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 11555
70 % 4 5 7465
50 % 4 5 6874
40 % 4 5 6405
30 % 4 5 5731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures