Sequence Similarity Clusters for the Entities in PDB 1OKR

Entity #1 | Chains: A,B
METHICILLIN RESISTANCE REGULATORY PROTEIN MECI protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 6438
95 % 1 5 5797 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 5 5790
70 % 1 5 5670
50 % 2 7 4102
40 % 2 7 3926
30 % 2 7 3614

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.