Sequence Similarity Clusters for the Entities in PDB 1OKQ

Entity #1 | Chains: A
LAMININ ALPHA 2 CHAIN protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52956
95 % 6 6 8454 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 6 8397
70 % 6 6 8098
50 % 6 6 7405
40 % 7 7 5644
30 % 7 7 5075

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.