Sequence Similarity Clusters for the Entities in PDB 1OKQ

Entity #1 | Chains: A
LAMININ ALPHA 2 CHAIN protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 10517
95 % 6 6 10218 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 6 10079
70 % 6 6 8354
50 % 6 6 8087
40 % 7 7 6026
30 % 7 7 5281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures