Sequence Similarity Clusters for the Entities in PDB 1OKO

Entity #1 | Chains: A,B,C,D
PA-I GALACTOPHILIC LECTIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 25 200
95 % 8 25 272 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 8 25 287
70 % 8 25 331
50 % 8 25 397
40 % 8 25 419
30 % 8 25 414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures