Sequence Similarity Clusters for the Entities in PDB 1OKO

Entity #1 | Chains: A,B,C,D
PA-I GALACTOPHILIC LECTIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 25 193
95 % 8 25 261 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 8 25 275
70 % 8 25 309
50 % 8 25 358
40 % 8 25 384
30 % 8 25 383

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.