Sequence Similarity Clusters for the Entities in PDB 1OKO

Entity #1 | Chains: A,B,C,D
PA-I GALACTOPHILIC LECTIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 25 201
95 % 8 25 270 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 8 25 284
70 % 8 25 323
50 % 8 25 385
40 % 8 25 414
30 % 8 25 412

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures