Sequence Similarity Clusters for the Entities in PDB 1OKK

Entity #1 | Chains: A
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 14 1885
95 % 7 19 1818
90 % 7 19 1865
70 % 7 19 1887
50 % 7 19 1900
40 % 7 21 1659
30 % 13 50 623
Entity #2 | Chains: D
CELL DIVISION PROTEIN FTSY protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 3608
95 % 1 9 4080
90 % 1 9 4099
70 % 1 9 4014
50 % 3 15 2318
40 % 6 25 1271
30 % 14 50 623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.