Sequence Similarity Clusters for the Entities in PDB 1OKK

Entity #1 | Chains: A
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 2065
95 % 7 19 1955 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 7 19 2003
70 % 7 19 2021
50 % 7 19 2029
40 % 7 21 1760
30 % 13 51 661
Entity #2 | Chains: D
CELL DIVISION PROTEIN FTSY protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3919
95 % 1 9 4392 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.8
PDBFlex
90 % 1 9 4417
70 % 1 9 4334
50 % 3 16 2353
40 % 6 26 1327
30 % 14 51 661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.