Sequence Similarity Clusters for the Entities in PDB 1OKK

Entity #1 | Chains: A
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 1980
95 % 7 19 1900 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.5
PDBFlex
90 % 7 19 1945
70 % 7 19 1967
50 % 7 19 1969
40 % 7 21 1705
30 % 13 51 643
Entity #2 | Chains: D
CELL DIVISION PROTEIN FTSY protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 3757
95 % 1 9 4245
90 % 1 9 4269
70 % 1 9 4176
50 % 3 16 2282
40 % 6 26 1287
30 % 14 51 643

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.