Sequence Similarity Clusters for the Entities in PDB 1OKJ

Entity #1 | Chains: A,B,C,D
TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAB protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19571
95 % 4 4 6721 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 4 6704
70 % 8 8 3600
50 % 9 11 1811
40 % 9 11 1823
30 % 9 11 1759

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.