Sequence Similarity Clusters for the Entities in PDB 1OKJ

Entity #1 | Chains: A,B,C,D
TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAB protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20799
95 % 4 4 7121 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 4 7097
70 % 8 8 3818
50 % 9 11 1931
40 % 9 11 1940
30 % 9 11 1867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures