Sequence Similarity Clusters for the Entities in PDB 1OKB

Entity #1 | Chains: A,B
URACIL-DNA GLYCOSYLASE protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6458
95 % 1 2 7074 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 7051
70 % 8 21 1801
50 % 19 43 880
40 % 39 71 553
30 % 40 72 545

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures