Sequence Similarity Clusters for the Entities in PDB 1OK9

Entity #1 | Chains: A,B
COMPLEMENT DECAY-ACCELERATING FACTOR protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 2858
95 % 7 9 3548 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 7 9 3598
70 % 7 9 3549
50 % 7 9 3460
40 % 7 9 3344
30 % 7 9 3125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OK3 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
2 1OJV 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
3 1OJW 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
4 1OK1 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
5 1OK2 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
6 1OJY 1 A, B, C, D COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
7 1OK9 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR SOAKED IN 2MM K2PTCL4 FOR 6 DAYS 2 PT(II) BINDING SITES GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
8 3J24 1 B Complement decay-accelerating factor four extracellular SCR domains (UNP residues 35-285) 9606
9 1M11 1 R decay-accelerating factor four SCR domains 1 to 4 9606