Sequence Similarity Clusters for the Entities in PDB 1OK9

Entity #1 | Chains: A,B
COMPLEMENT DECAY-ACCELERATING FACTOR protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 2797
95 % 7 9 3496 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 7 9 3542
70 % 7 9 3504
50 % 7 9 3426
40 % 7 9 3313
30 % 7 9 3095

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OK3 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
2 1OJV 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
3 1OJW 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
4 1OK1 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
5 1OK2 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS RESIDUES 35-285 9606
6 1OJY 1 A, B, C, D COMPLEMENT DECAY-ACCELERATING FACTOR MODELLED GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
7 1OK9 1 A, B COMPLEMENT DECAY-ACCELERATING FACTOR SOAKED IN 2MM K2PTCL4 FOR 6 DAYS 2 PT(II) BINDING SITES GLYCEROLS, ACETATES AND SULPHATES FROM CRYSTALLISATION BUFFER FOUR EXTRACELLULAR SCR DOMAINS, RESIDUES 35-285 9606
8 3J24 1 B Complement decay-accelerating factor four extracellular SCR domains (UNP residues 35-285) 9606
9 1M11 1 R decay-accelerating factor four SCR domains 1 to 4 9606