Sequence Similarity Clusters for the Entities in PDB 1OK8

Entity #1 | Chains: A
MAJOR ENVELOPE PROTEIN E protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 3964
95 % 1 25 852 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 3.7
PDBFlex
90 % 1 25 884
70 % 1 25 913
50 % 4 51 454
40 % 5 56 436
30 % 5 56 440

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures