Sequence Similarity Clusters for the Entities in PDB 1OJY

Entity #1 | Chains: A,B,C,D
COMPLEMENT DECAY-ACCELERATING FACTOR protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 2889
95 % 6 9 3581 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 6 9 3630
70 % 6 9 3579
50 % 6 9 3491
40 % 6 9 3366
30 % 6 9 3151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures