Sequence Similarity Clusters for the Entities in PDB 1OJW

Entity #1 | Chains: A,B
COMPLEMENT DECAY-ACCELERATING FACTOR protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 3219
95 % 3 9 3531 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 3 9 3604
70 % 3 9 3546
50 % 3 9 3467
40 % 3 9 3328
30 % 3 9 3075

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures