Sequence Similarity Clusters for the Entities in PDB 1OJV

Entity #1 | Chains: A,B
COMPLEMENT DECAY-ACCELERATING FACTOR protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 2919
95 % 2 9 3620 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 2 9 3672
70 % 2 9 3625
50 % 2 9 3529
40 % 2 9 3402
30 % 2 9 3182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures