Sequence Similarity Clusters for the Entities in PDB 1OJD

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,L
AMINE OXIDASE [FLAVIN-CONTAINING] B protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 32 469
95 % 40 40 501 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 40 40 532
70 % 44 45 468
50 % 44 45 526
40 % 44 45 564
30 % 44 45 561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures