Sequence Similarity Clusters for the Entities in PDB 1OJA

Entity #1 | Chains: A,B
AMINE OXIDASE [FLAVIN-CONTAINING] B protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 41 402
95 % 8 43 475 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 8 43 508
70 % 8 48 476
50 % 8 48 528
40 % 8 48 574
30 % 8 48 574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures