Sequence Similarity Clusters for the Entities in PDB 1OJ9

Entity #1 | Chains: A,B
AMINE OXIDASE [FLAVIN-CONTAINING] B protein, length: 520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 41 402
95 % 37 43 473 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 37 43 506
70 % 39 48 474
50 % 39 48 528
40 % 39 48 574
30 % 39 48 575

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures