Sequence Similarity Clusters for the Entities in PDB 1OJ8

Entity #1 | Chains: A
RC-RNASE6 RIBONUCLEASE protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35387
95 % 1 2 30231 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 29010
70 % 1 4 15789
50 % 12 19 3226
40 % 13 25 2178
30 % 354 763 22
Entity #2 | Chains: B
5'-D(*AP*CP*GP*AP)-3' dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures