Sequence Similarity Clusters for the Entities in PDB 1OJ4

Entity #1 | Chains: A,B
4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21042
95 % 1 2 19096 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 18570
70 % 1 2 17094
50 % 1 2 14907
40 % 1 2 13292
30 % 5 16 2505

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EMD 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 36809 2.7.1.148 | Details
2 1UEK 1 A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase 274 2.7.1.148 | Details
3 4ED4 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 36809 2.7.1.148 | Details
4 3PYF 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1773 2.7.1.148 | Details
5 1OJ4 1 A, B 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE 562 2.7.1.148 | Details
6 4DXL 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 36809 2.7.1.148 | Details
7 2WW4 1 A, B 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE 562 2.7.1.148 | Details
8 3PYE 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1773 2.7.1.148 | Details
9 3PYG 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1773 2.7.1.148 | Details
10 3PYD 1 A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1773 2.7.1.148 | Details
11 2V8P 1 A, B 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details
12 2V2Z 1 A, B 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details
13 2V34 1 A, B 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details
14 2VF3 1 A, B 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details
15 2V2Q 1 A, B 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details
16 2V2V 1 A, B 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE 63363 2.7.1.148 | Details