Sequence Similarity Clusters for the Entities in PDB 1OIZ

Entity #1 | Chains: A,B
ALPHA-TOCOPHEROL TRANSFER PROTEIN protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 20582
95 % 2 3 18110 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 2 5 5900
70 % 2 5 5784
50 % 2 5 5453
40 % 2 5 5122
30 % 2 5 4650

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures