Sequence Similarity Clusters for the Entities in PDB 1OIZ

Entity #1 | Chains: A,B
ALPHA-TOCOPHEROL TRANSFER PROTEIN protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 20255
95 % 2 3 17841 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 2 5 5801
70 % 2 5 5695
50 % 2 5 5376
40 % 2 5 5058
30 % 2 5 4583

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures