Sequence Similarity Clusters for the Entities in PDB 1OIY

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 4567
95 % 340 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 340 383 38
70 % 340 383 46
50 % 365 433 65
40 % 376 465 54
30 % 3330 4300 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 54 83 185
95 % 74 105 160 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 78 109 163
70 % 78 109 182
50 % 78 109 224
40 % 78 109 249
30 % 81 115 259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures