Sequence Similarity Clusters for the Entities in PDB 1OIU

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 12 2786
95 % 236 393 38 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 236 393 43
70 % 236 393 54
50 % 247 448 76
40 % 250 483 76
30 % 1864 4612 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 84 194
95 % 21 110 192 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 23 114 175
70 % 23 114 195
50 % 23 114 238
40 % 23 114 268
30 % 25 123 267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures