Sequence Similarity Clusters for the Entities in PDB 1OIU

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 4615
95 % 228 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 228 383 38
70 % 228 383 46
50 % 238 433 67
40 % 241 465 55
30 % 1725 4356 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 83 188
95 % 18 105 179 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 20 109 164
70 % 20 109 185
50 % 20 109 228
40 % 20 109 254
30 % 21 115 260

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures