Sequence Similarity Clusters for the Entities in PDB 1OIU

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 218 364 22
95 % 224 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 224 379 36
70 % 224 379 44
50 % 233 404 66
40 % 237 460 49
30 % 1496 3902 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 86 166
95 % 18 105 151 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 20 109 158
70 % 20 109 175
50 % 20 109 216
40 % 20 109 235
30 % 21 115 232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.