Sequence Similarity Clusters for the Entities in PDB 1OIP

Entity #1 | Chains: A
ALPHA-TOCOPHEROL TRANSFER PROTEIN protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19640
95 % 3 3 17365 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 3 5 5628
70 % 3 5 5538
50 % 3 5 5229
40 % 3 5 4918
30 % 3 5 4466

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.