Sequence Similarity Clusters for the Entities in PDB 1OIP

Entity #1 | Chains: A
ALPHA-TOCOPHEROL TRANSFER PROTEIN protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19891
95 % 3 3 17566 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 3 5 5713
70 % 3 5 5612
50 % 3 5 5296
40 % 3 5 4985
30 % 3 5 4524

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures