Sequence Similarity Clusters for the Entities in PDB 1OIP

Entity #1 | Chains: A
ALPHA-TOCOPHEROL TRANSFER PROTEIN protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19051
95 % 3 3 16849 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 3 5 5439
70 % 3 5 5363
50 % 3 5 5075
40 % 3 5 4783
30 % 3 5 4348

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.