Sequence Similarity Clusters for the Entities in PDB 1OIJ

Entity #1 | Chains: A
PUTATIVE ALKYLSULFATASE ATSK protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26942
95 % 3 8 3137 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 3 8 3185
70 % 3 8 3163
50 % 7 14 1191
40 % 9 16 1124
30 % 13 25 690
Entity #2 | Chains: B,D
PUTATIVE ALKYLSULFATASE ATSK protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3348
95 % 4 8 3137 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 4 8 3185
70 % 4 8 3163
50 % 8 14 1191
40 % 10 16 1124
30 % 14 25 690
Entity #3 | Chains: C
PUTATIVE ALKYLSULFATASE ATSK protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56926
95 % 5 8 3137 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 5 8 3185
70 % 5 8 3163
50 % 9 14 1191
40 % 11 16 1124
30 % 15 25 690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures