Sequence Similarity Clusters for the Entities in PDB 1OID

Entity #1 | Chains: A,B
PROTEIN USHA protein, length: 532 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28156
95 % 5 9 4123 Flexibility: Medium
Max RMSD: 10.0, Avg RMSD: 5.3
PDBFlex
90 % 5 9 4169
70 % 5 9 4096
50 % 5 9 3977
40 % 5 9 3887
30 % 13 19 1994

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures