Sequence Similarity Clusters for the Entities in PDB 1OID

Entity #1 | Chains: A,B
PROTEIN USHA protein, length: 532 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25281
95 % 5 9 3876 Flexibility: Medium
Max RMSD: 9.9, Avg RMSD: 5.3
PDBFlex
90 % 5 9 3916
70 % 5 9 3873
50 % 5 9 3770
40 % 5 9 3627
30 % 12 17 2140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.