Sequence Similarity Clusters for the Entities in PDB 1OHH

Entity #1 | Chains: A,B,C
ATP synthase subunit alpha, mitochondrial protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 29 295
95 % 17 41 274 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 17 41 285
70 % 21 59 166
50 % 24 71 166
40 % 24 71 182
30 % 24 71 197
Entity #2 | Chains: D,E,F
ATP synthase subunit beta, mitochondrial protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 40 203
95 % 18 42 275 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 18 42 286
70 % 25 72 138
50 % 25 72 167
40 % 25 72 183
30 % 25 72 198
Entity #3 | Chains: G
ATP synthase subunit gamma, mitochondrial protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 39 867
95 % 16 39 1176 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.4
PDBFlex
90 % 16 39 1204
70 % 17 41 1178
50 % 17 41 1236
40 % 22 65 622
30 % 22 65 615
Entity #4 | Chains: H
ATPase inhibitor, mitochondrial protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69424
95 % 2 2 14681 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.8
PDBFlex
90 % 2 2 14404
70 % 2 2 13490
50 % 2 2 11992
40 % 2 2 10869
30 % 2 2 9438

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.