Sequence Similarity Clusters for the Entities in PDB 1OHH

Entity #1 | Chains: A,B,C
ATP synthase subunit alpha, mitochondrial protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 29 302
95 % 17 41 278 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 17 41 290
70 % 21 59 167
50 % 24 71 168
40 % 24 71 183
30 % 24 71 201
Entity #2 | Chains: D,E,F
ATP synthase subunit beta, mitochondrial protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 40 206
95 % 18 42 279 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 18 42 291
70 % 25 72 139
50 % 25 72 169
40 % 25 72 184
30 % 25 72 202
Entity #3 | Chains: G
ATP synthase subunit gamma, mitochondrial protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 39 882
95 % 16 39 1190 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.3
PDBFlex
90 % 16 39 1217
70 % 17 41 1191
50 % 17 41 1247
40 % 22 65 631
30 % 22 65 621
Entity #4 | Chains: H
ATPase inhibitor, mitochondrial protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70530
95 % 2 2 14931 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.8
PDBFlex
90 % 2 2 14655
70 % 2 2 13743
50 % 2 2 12195
40 % 2 2 11059
30 % 2 2 9607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.