Sequence Similarity Clusters for the Entities in PDB 1OH8

Entity #1 | Chains: A,B
DNA MISMATCH REPAIR PROTEIN MUTS protein, length: 800 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 3106
95 % 10 16 1269 Flexibility: Medium
Max RMSD: 16.6, Avg RMSD: 7.6
PDBFlex
90 % 10 16 1300
70 % 10 16 1328
50 % 10 18 1245
40 % 12 21 1123
30 % 12 21 1106
Entity #2 | Chains: E
5'-D(*AP*GP*CP*TP*GP*CP*CP*AP*GP*GP *CP*AP*CP*CP*AP*GP*TP*GP*TP*CP*AP*GP*CP*GP*TP*CP*CP* TP*AP*T)-3' dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
5'-D(*AP*TP*AP*GP*GP*AP*CP*GP*CP*TP *GP*AP*CP*AP*CP*TP*GP*GP*TP*GP*CP*CP*TP*TP*GP*GP*CP* AP*GP*CP*T)-3' dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.