Sequence Similarity Clusters for the Entities in PDB 1OGY

Entity #1 | Chains: A,C,E,G,I,K,M,O
PERIPLASMIC NITRATE REDUCTASE protein, length: 802 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 7385
95 % 1 1 7913 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 7871
70 % 4 4 5037
50 % 4 4 4820
40 % 4 4 4559
30 % 4 4 4175
Entity #2 | Chains: B,D,F,H,J,L,N,P
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9329
95 % 1 1 9440 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 9337
70 % 1 1 8902
50 % 1 1 8053
40 % 1 1 7389
30 % 1 1 6517

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.