Sequence Similarity Clusters for the Entities in PDB 1OGY

Entity #1 | Chains: A,C,E,G,I,K,M,O
PERIPLASMIC NITRATE REDUCTASE protein, length: 802 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 7724
95 % 1 1 8265 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 8216
70 % 4 4 5284
50 % 4 4 5042
40 % 4 4 4767
30 % 4 4 4355
Entity #2 | Chains: B,D,F,H,J,L,N,P
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9740
95 % 1 1 9841 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 9724
70 % 1 1 9276
50 % 1 1 8394
40 % 1 1 7694
30 % 1 1 6782

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures