Sequence Similarity Clusters for the Entities in PDB 1OGY

Entity #1 | Chains: A,C,E,G,I,K,M,O
PERIPLASMIC NITRATE REDUCTASE protein, length: 802 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9323
95 % 1 1 9223 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 9125
70 % 4 4 5599
50 % 4 4 5740
40 % 4 4 5355
30 % 16 16 2383
Entity #2 | Chains: B,D,F,H,J,L,N,P
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 10663
95 % 1 1 10350 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 10207
70 % 1 1 9676
50 % 1 1 8740
40 % 1 1 7946
30 % 1 1 6883

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures