Sequence Similarity Clusters for the Entities in PDB 1OGY

Entity #1 | Chains: A,C,E,G,I,K,M,O
PERIPLASMIC NITRATE REDUCTASE protein, length: 802 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 7590
95 % 1 1 8154 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 8107
70 % 4 4 5211
50 % 4 4 4970
40 % 4 4 4701
30 % 4 4 4299
Entity #2 | Chains: B,D,F,H,J,L,N,P
DIHEME CYTOCHROME C NAPB MOLECULE: NITRATE REDUCTASE protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9591
95 % 1 1 9715 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 9602
70 % 1 1 9164
50 % 1 1 8286
40 % 1 1 7594
30 % 1 1 6699

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.