Sequence Similarity Clusters for the Entities in PDB 1OGV

Entity #1 | Chains: H
REACTION CENTER PROTEIN H CHAIN protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 95 239
95 % 29 96 334
90 % 29 96 360
70 % 29 96 398
50 % 29 96 464
40 % 44 125 348
30 % 44 125 358
Entity #2 | Chains: L
REACTION CENTER PROTEIN L CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 68 396
95 % 29 96 332
90 % 29 96 359
70 % 29 96 397
50 % 44 125 326
40 % 44 125 347
30 % 44 125 357
Entity #3 | Chains: M
REACTION CENTER PROTEIN M CHAIN protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 61 457
95 % 29 96 331
90 % 29 96 357
70 % 29 96 395
50 % 44 125 325
40 % 44 125 346
30 % 44 125 356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.