Sequence Similarity Clusters for the Entities in PDB 1OGU

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 312 361 21
95 % 326 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 326 376 34
70 % 326 376 42
50 % 344 401 55
40 % 358 457 41
30 % 2756 3732 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 86 158
95 % 68 105 146 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 72 109 151
70 % 72 109 172
50 % 72 109 202
40 % 72 109 225
30 % 75 115 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.