Sequence Similarity Clusters for the Entities in PDB 1OGT

Entity #1 | Chains: A
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 19 2273
95 % 5 34 1391
90 % 10 189 139
70 % 17 656 7
50 % 17 661 7
40 % 18 708 11
30 % 18 824 14
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 575 2
95 % 20 618 3
90 % 20 627 4
70 % 21 854 5
50 % 22 874 5
40 % 22 874 9
30 % 22 874 13
Entity #3 | Chains: C
VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR 1 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.