Sequence Similarity Clusters for the Entities in PDB 1OGK

Entity #1 | Chains: A,B,D,E
DEOXYURIDINE TRIPHOSPHATASE protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14993
95 % 2 2 14141 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.9
PDBFlex
90 % 2 2 13914
70 % 2 2 13086
50 % 7 7 5772
40 % 11 11 2865
30 % 11 11 2672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.