Sequence Similarity Clusters for the Entities in PDB 1OGK

Entity #1 | Chains: A,B,D,E
DEOXYURIDINE TRIPHOSPHATASE protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15633
95 % 2 2 14674 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.9
PDBFlex
90 % 2 2 14442
70 % 2 2 13562
50 % 7 7 5969
40 % 11 11 2963
30 % 11 11 2764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures