Sequence Similarity Clusters for the Entities in PDB 1OGF

Entity #1 | Chains: A,B,C,D,E
HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 2444
95 % 4 4 3076 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 3116
70 % 4 4 3092
50 % 4 4 3011
40 % 4 7 1297
30 % 8 12 626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.