Sequence Similarity Clusters for the Entities in PDB 1OGF

Entity #1 | Chains: A,B,C,D,E
HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3054
95 % 4 4 3376 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 3435
70 % 4 4 3368
50 % 4 4 3287
40 % 4 7 1382
30 % 8 12 684

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures