Sequence Similarity Clusters for the Entities in PDB 1OGF

Entity #1 | Chains: A,B,C,D,E
HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 2967
95 % 4 4 3271 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 3324
70 % 4 4 3273
50 % 4 4 3195
40 % 4 7 1340
30 % 8 12 660

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures