Sequence Similarity Clusters for the Entities in PDB 1OGE

Entity #1 | Chains: A,B,C,D,E
HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 2619
95 % 3 4 3260 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 4 3301
70 % 3 4 3261
50 % 3 4 3174
40 % 3 7 1351
30 % 7 12 648

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures