Sequence Similarity Clusters for the Entities in PDB 1OFU

Entity #1 | Chains: A,B
CELL DIVISION PROTEIN FTSZ protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37145
95 % 1 1 29229
90 % 1 1 28206
70 % 1 1 25443
50 % 14 24 1249
40 % 17 33 904
30 % 17 33 886
Entity #2 | Chains: X,Y
HYPOTHETICAL PROTEIN PA3008 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47541
95 % 1 1 35526 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 33909
70 % 1 1 30138
50 % 1 1 25695
40 % 1 1 22617
30 % 1 1 19142

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures