Sequence Similarity Clusters for the Entities in PDB 1OFU

Entity #1 | Chains: A,B
CELL DIVISION PROTEIN FTSZ protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36418
95 % 1 1 28696
90 % 1 1 27707
70 % 1 1 25012
50 % 14 24 1222
40 % 17 33 887
30 % 17 33 869
Entity #2 | Chains: X,Y
HYPOTHETICAL PROTEIN PA3008 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46654
95 % 1 1 34910 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 33346
70 % 1 1 29656
50 % 1 1 25315
40 % 1 1 22280
30 % 1 1 18864

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures