Sequence Similarity Clusters for the Entities in PDB 1OFI

Entity #1 | Chains: A,B,C
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12482
95 % 2 2 12118 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 2 2 11950
70 % 2 2 11292
50 % 2 2 10129
40 % 2 2 9213
30 % 2 2 8068
Entity #2 | Chains: G,H,I,L,M,N
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 952
95 % 4 6 1281 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 4 6 1316
70 % 9 16 509
50 % 15 23 368
40 % 15 23 383
30 % 15 23 388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures