Sequence Similarity Clusters for the Entities in PDB 1OFI

Entity #1 | Chains: A,B,C
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12252
95 % 2 2 11915 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 2 2 11746
70 % 2 2 11104
50 % 2 2 9961
40 % 2 2 9065
30 % 2 2 7941
Entity #2 | Chains: G,H,I,L,M,N
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 937
95 % 4 6 1257 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 4 6 1290
70 % 9 16 486
50 % 15 23 361
40 % 15 23 377
30 % 15 23 377

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures