Sequence Similarity Clusters for the Entities in PDB 1OFH

Entity #1 | Chains: A,B,C
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12673
95 % 1 2 12295 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 12123
70 % 1 2 11447
50 % 1 2 10262
40 % 1 2 9327
30 % 1 2 8171
Entity #2 | Chains: G,H,I,L,M,N
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 964
95 % 3 6 1295 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 3 6 1325
70 % 3 16 520
50 % 6 23 376
40 % 6 23 397
30 % 6 23 399

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures