Sequence Similarity Clusters for the Entities in PDB 1OFH

Entity #1 | Chains: A,B,C
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12458
95 % 1 2 12094 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 11926
70 % 1 2 11273
50 % 1 2 10112
40 % 1 2 9198
30 % 1 2 8055
Entity #2 | Chains: G,H,I,L,M,N
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 950
95 % 3 6 1280 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 3 6 1315
70 % 3 16 507
50 % 6 23 367
40 % 6 23 382
30 % 6 23 388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures