Sequence Similarity Clusters for the Entities in PDB 1OFH

Entity #1 | Chains: A,B,C
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12200
95 % 1 2 11872 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 11706
70 % 1 2 11064
50 % 1 2 9926
40 % 1 2 9035
30 % 1 2 7914
Entity #2 | Chains: G,H,I,L,M,N
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 930
95 % 3 6 1250 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 3 6 1283
70 % 3 16 457
50 % 6 23 339
40 % 6 23 355
30 % 6 23 362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.