Sequence Similarity Clusters for the Entities in PDB 1OFD

Entity #1 | Chains: A,B
FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2 protein, length: 1520 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10404
95 % 1 5 10404 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 5 10277
70 % 1 5 9746
50 % 1 5 8822
40 % 1 7 4025
30 % 1 7 3732

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures