Sequence Similarity Clusters for the Entities in PDB 1OF5

Entity #1 | Chains: A
MRNA EXPORT FACTOR MEX67 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61866
95 % 1 1 43436
90 % 1 1 41361
70 % 1 1 36494
50 % 1 1 31072
40 % 2 2 16231
30 % 2 2 13878
Entity #2 | Chains: B
MRNA TRANSPORT REGULATOR MTR2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16133
95 % 1 2 15063 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 14782
70 % 1 2 13855
50 % 1 2 12304
40 % 1 2 11136
30 % 1 2 9677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures