Sequence Similarity Clusters for the Entities in PDB 1OF5

Entity #1 | Chains: A
MRNA EXPORT FACTOR MEX67 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57865
95 % 1 1 40651
90 % 1 1 38818
70 % 1 1 34384
50 % 1 1 29349
40 % 2 2 15276
30 % 2 2 13057
Entity #2 | Chains: B
MRNA TRANSPORT REGULATOR MTR2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14896
95 % 1 2 13997 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 13729
70 % 1 2 12879
50 % 1 2 11482
40 % 1 2 10406
30 % 1 2 9021

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.