Sequence Similarity Clusters for the Entities in PDB 1OF3

Entity #1 | Chains: A,B
BETA-MANNOSIDASE protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22360
95 % 3 3 19305 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 18794
70 % 3 3 17376
50 % 3 3 15086
40 % 3 3 13424
30 % 3 3 11497

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures