Sequence Similarity Clusters for the Entities in PDB 1OF3

Entity #1 | Chains: A,B
BETA-MANNOSIDASE protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19100
95 % 3 3 19588 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 19047
70 % 3 3 17529
50 % 3 3 15265
40 % 3 3 13554
30 % 3 3 11402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures