Sequence Similarity Clusters for the Entities in PDB 1OF2

Entity #1 | Chains: A
HUMAN LYMPHOCYTE ANTIGEN HLA-B27 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 5773
95 % 29 34 1524 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 146 201 135
70 % 365 727 6
50 % 366 732 6
40 % 389 783 10
30 % 418 907 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 337 624 2
95 % 364 668 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 367 677 4
70 % 437 922 4
50 % 445 944 3
40 % 445 944 7
30 % 445 944 12
Entity #3 | Chains: C
VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures