Sequence Similarity Clusters for the Entities in PDB 1OEY

Entity #1 | Chains: A,B,C,D
NEUTROPHIL CYTOSOL FACTOR 2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21009
95 % 1 1 18941 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 18437
70 % 1 1 16982
50 % 1 1 14808
40 % 1 1 13194
30 % 1 1 11103
Entity #2 | Chains: J,K,L,M
NEUTROPHIL CYTOSOL FACTOR 4 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21010
95 % 1 1 18942 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 1 18438
70 % 1 1 16983
50 % 1 1 14809
40 % 1 1 13195
30 % 1 1 11104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures