Sequence Similarity Clusters for the Entities in PDB 1OEY

Entity #1 | Chains: A,B,C,D
NEUTROPHIL CYTOSOL FACTOR 2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24344
95 % 1 1 20768 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 20192
70 % 1 1 18551
50 % 1 1 16095
40 % 1 1 14350
30 % 1 1 12279
Entity #2 | Chains: J,K,L,M
NEUTROPHIL CYTOSOL FACTOR 4 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23908
95 % 1 1 20448 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 1 19880
70 % 1 1 18271
50 % 1 1 15859
40 % 1 1 14132
30 % 1 1 12093

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures