Sequence Similarity Clusters for the Entities in PDB 1OEJ

Entity #1 | Chains: A
HYPOTHETICAL PROTEIN YODA protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 11041
95 % 3 6 10687 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 6 10538
70 % 3 9 6899
50 % 3 9 6408
40 % 3 9 6008
30 % 3 9 5261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures