Sequence Similarity Clusters for the Entities in PDB 1OED

Entity #1 | Chains: A,D
ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37207
95 % 1 1 28570
90 % 1 1 27570
70 % 1 1 24923
50 % 1 1 21368
40 % 1 2 14774
30 % 1 4 8645
Entity #2 | Chains: B
ACETYLCHOLINE RECEPTOR PROTEIN, BETA CHAIN protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54726
95 % 1 1 38703
90 % 1 1 37050
70 % 1 1 32993
50 % 1 1 28229
40 % 2 2 14774
30 % 2 4 8645
Entity #3 | Chains: C
ACETYLCHOLINE RECEPTOR PROTEIN, DELTA CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54232
95 % 1 1 38466
90 % 1 1 36829
70 % 1 1 32818
50 % 1 1 28098
40 % 1 2 18367
30 % 3 4 8645
Entity #4 | Chains: E
ACETYLCHOLINE RECEPTOR PROTEIN, GAMMA CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54233
95 % 1 1 38467
90 % 1 1 36830
70 % 1 1 32819
50 % 1 1 28099
40 % 2 2 18367
30 % 4 4 8645

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.