Sequence Similarity Clusters for the Entities in PDB 1OED

Entity #1 | Chains: A,D
ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39421
95 % 1 1 30268
90 % 1 1 29170
70 % 1 1 26238
50 % 1 1 22410
40 % 1 2 15516
30 % 1 4 9140
Entity #2 | Chains: B
ACETYLCHOLINE RECEPTOR PROTEIN, BETA CHAIN protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57811
95 % 1 1 40928
90 % 1 1 39100
70 % 1 1 34693
50 % 1 1 29584
40 % 2 2 15516
30 % 2 4 9140
Entity #3 | Chains: C
ACETYLCHOLINE RECEPTOR PROTEIN, DELTA CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57289
95 % 1 1 40675
90 % 1 1 38863
70 % 1 1 34506
50 % 1 1 29449
40 % 1 2 19266
30 % 3 4 9140
Entity #4 | Chains: E
ACETYLCHOLINE RECEPTOR PROTEIN, GAMMA CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57290
95 % 1 1 40676
90 % 1 1 38864
70 % 1 1 34507
50 % 1 1 29450
40 % 2 2 19266
30 % 4 4 9140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.