Sequence Similarity Clusters for the Entities in PDB 1OE9

Entity #1 | Chains: A
MYOSIN VA protein, length: 795 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10055
95 % 2 4 10114 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 2 5 8135
70 % 2 5 7864
50 % 2 7 4996
40 % 25 101 291
30 % 33 126 241
Entity #2 | Chains: B
MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE A ISOFORM protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28856
95 % 2 3 23964 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 3 23169
70 % 2 25 618
50 % 2 25 665
40 % 93 341 42
30 % 98 368 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures