Sequence Similarity Clusters for the Entities in PDB 1OE9

Entity #1 | Chains: A
MYOSIN VA protein, length: 795 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9917
95 % 2 4 9988 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.9
PDBFlex
90 % 2 5 8034
70 % 2 5 7777
50 % 2 7 4929
40 % 25 101 284
30 % 33 126 238
Entity #2 | Chains: B
MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE A ISOFORM protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28513
95 % 2 3 23685 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 3 22911
70 % 2 25 610
50 % 2 25 653
40 % 92 339 39
30 % 97 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.