Sequence Similarity Clusters for the Entities in PDB 1OE9

Entity #1 | Chains: A
MYOSIN VA protein, length: 795 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 11596
95 % 2 4 11198 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 2 5 9764
70 % 2 5 9304
50 % 2 7 5745
40 % 26 111 276
30 % 35 135 234
Entity #2 | Chains: B
MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE A ISOFORM protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30013
95 % 2 3 22868 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 3 22133
70 % 2 25 653
50 % 2 25 701
40 % 97 361 40
30 % 119 432 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures