Sequence Similarity Clusters for the Entities in PDB 1OE9

Entity #1 | Chains: A
MYOSIN VA protein, length: 795 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10243
95 % 2 4 10274 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 2 5 8265
70 % 2 5 7986
50 % 2 7 5077
40 % 25 101 296
30 % 33 133 220
Entity #2 | Chains: B
MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE A ISOFORM protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29363
95 % 2 3 24338 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 3 23519
70 % 2 25 629
50 % 2 25 677
40 % 94 349 43
30 % 99 376 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures