Sequence Similarity Clusters for the Entities in PDB 1OE4

Entity #1 | Chains: A,B
SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12156
95 % 1 3 11741 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 3 11575
70 % 1 3 10925
50 % 2 7 4042
40 % 2 7 3863
30 % 2 7 3559
Entity #2 | Chains: E
5'-D(*CP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
5'-D(*CP*GP*GP*AP*CP*TP*3DR*AP*CP*GP*GP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.