Sequence Similarity Clusters for the Entities in PDB 1ODV

Entity #1 | Chains: A,B
PHOTOACTIVE YELLOW PROTEIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47252
95 % 1 1 35332 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 33753
70 % 1 1 30017
50 % 1 1 25628
40 % 1 1 22579
30 % 1 1 19117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.