Sequence Similarity Clusters for the Entities in PDB 1ODU

Entity #1 | Chains: A,B
PUTATIVE ALPHA-L-FUCOSIDASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 14 1846
95 % 14 14 2167 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 14 14 2223
70 % 14 14 2233
50 % 14 14 2200
40 % 14 14 2204
30 % 14 14 2079

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures